Updated function to return character vector of the super region acronyms after inputting a character vector of acronyms — get.super.regions • SMARTR

Updated function to return character vector of the super region acronyms after inputting a character vector of acronyms

Usage

get.super.regions(
  acronym,
  anatomical.order = c("Isocortex", "OLF", "HPF", "CTXsp", "CNU", "TH", "HY", "MB",
    "HB", "CB"),
  ontology = "allen"
)

Arguments

acronym: (str vec) character vector of acronyms. Cannot be a factor vector.
anatomical.order: (default = c("Isocortex", "OLF", "HPF", "CTXsp", "CNU","TH", "HY", "MB", "HB", "CB")) Default way to group subregions into super regions order
ontology: (str, default = "allen") Region ontology to use. options = "allen" or "unified"

Value