Register (generic function)
register.Rd
Register (generic function)
Register a slice in a slice object
Register a slice in a mouse object. If a slice has been previously registered, the default behavior is to continue modifying the
previous registration. Use the replace
parameter to change this behavior.
Usage
register(x, ...)
# S3 method for slice
register(s, filter = NULL, ...)
# S3 method for mouse
register(
m,
slice_ID = NA,
hemisphere = NULL,
filter = NULL,
replace = FALSE,
...
)
Arguments
- ...
additional parameters to pass to the SMART::registration2() function, besides 'input', 'coordinate', 'filter' & 'correspondance'
- s
slice object
- filter
(list) Wholebrain filter with parameters.
- m
mouse object
- slice_ID
(str) ID of slice
- hemisphere
(str, default = NULL) 'left', 'right' or NULL if both hemispheres are included
- replace
(bool, default = FALSE) Replace a registration already contained in a mouse object by resetting to NULL value before registration improvement loop.